Matthieu Schapira, PhD is a Professor in the Department of Pharmacology and Toxicology, UofT, and is the head of computational chemistry, protein bioinformatics, and data management at the SGC-Toronto. He leads the CACHE initiative for benchmarking computational ‘hit finding’. Dr. Schapira is a recognized authority in the structural chemistry of drug target classes such as chromatin regulators, ubiquitylation pathways and WDR proteins, and has created popular online informatics resources for these targets such as Chromohub, Ubihub and ChemBioPort. He is interested in novel strategies to expand and ML tools to exploit the accessible chemistry space. His trainees have gone on to become important innovators in AI-driven drug discovery at Toronto-born biotechs such as Atomwise and Cyclica.
Arrowsmith CH, Bountra C, Fish PV, Lee K, Schapira M
Nat Rev Drug Discov. 2012-4-13 . 11(5):384-400 .doi: 10.1038/nrd3674
PMID: 22498752Santiago C, Nguyen K, Schapira M
J. Comput. Aided Mol. Des.. 2011-12-7 . 25(12):1171-8 .doi: 10.1007/s10822-011-9505-2
PMID: 22146969Artz JD, Wernimont AK, Allali-Hassani A, Zhao Y, Amani M, Lin YH, Senisterra G, Wasney GA, Fedorov O, King O, Roos A, Lunin VV, Qiu W, Finerty P, Hutchinson A, Chau I, von Delft F, MacKenzie F, Lew J, Kozieradzki I, Vedadi M, Schapira M, Zhang C, Shokat K, Heightman T, Hui R
BMC Genomics. 2011-9-30 . 12:478 .doi: 10.1186/1471-2164-12-478
PMID: 21962082Schapira M
Handb Exp Pharmacol. 2011-9-1 . 206:225-40 .doi: 10.1007/978-3-642-21631-2_10
PMID: 21879452Wallach I, Jaitly N, Nguyen K, Schapira M, Lilien R
J Chem Inf Model. 2011-8-22 . 51(8):1817-30 .doi: 10.1021/ci200175h
PMID: 21699246Schapira M
Curr Chem Genomics. 2011-8-22 . 5(Suppl 1):85-94 .doi: 10.2174/1875397301005010085
PMID: 21966348Campagna-Slater V, Mok MW, Nguyen KT, Feher M, Najmanovich R, Schapira M
J Chem Inf Model. 2011-3-28 . 51(3):612-23 .doi: 10.1021/ci100479z
PMID: 21366357Yap DB, Chu J, Berg T, Schapira M, Cheng SW, Moradian A, Morin RD, Mungall AJ, Meissner B, Boyle M, Marquez VE, Marra MA, Gascoyne RD, Humphries RK, Arrowsmith CH, Morin GB, Aparicio SA
Blood. 2011-2-24 . 117(8):2451-9 .doi: 10.1182/blood-2010-11-321208
PMID: 21190999Artz JD, Wernimont AK, Dunford JE, Schapira M, Dong A, Zhao Y, Lew J, Russell RG, Ebetino FH, Oppermann U, Hui R
J. Biol. Chem.. 2011-2-4 . 286(5):3315-22 .doi: 10.1074/jbc.M109.027235
PMID: 21084289Kaustov L, Ouyang H, Amaya M, Lemak A, Nady N, Duan S, Wasney GA, Li Z, Vedadi M, Schapira M, Min J, Arrowsmith CH
J. Biol. Chem.. 2011-1-7 . 286(1):521-9 .doi: 10.1074/jbc.M110.191411
PMID: 21047797