Matthieu Schapira

Matthieu Schapira

SGC Toronto

Schapira

Matthieu Schapira

MaRS Centre, South Tower, 101 College St., Suite 700, Toronto, ON, M5G 1L7, Canada

Affiliations

Biography

Matthieu Schapira, PhD is a Professor in the Department of Pharmacology and Toxicology, UofT, and is the head of computational chemistry, protein bioinformatics, and data management at the SGC-Toronto. He leads the CACHE initiative for benchmarking computational ‘hit finding’. Dr. Schapira is a recognized authority in the structural chemistry of drug target classes such as chromatin regulators, ubiquitylation pathways and WDR proteins, and has created popular online informatics resources for these targets such as Chromohub, Ubihub and ChemBioPort. He is interested in novel strategies to expand and ML tools to exploit the accessible chemistry space. His trainees have gone on to become important innovators in AI-driven drug discovery at Toronto-born biotechs such as Atomwise and Cyclica.

Positions available

2012

Epigenetic protein families: a new frontier for drug discovery.

Arrowsmith CH, Bountra C, Fish PV, Lee K, Schapira M

Nat Rev Drug Discov. 2012-4-13 . 11(5):384-400 .doi: 10.1038/nrd3674

PMID: 22498752

2011

Druggability of methyl-lysine binding sites.

Santiago C, Nguyen K, Schapira M

J. Comput. Aided Mol. Des.. 2011-12-7 . 25(12):1171-8 .doi: 10.1007/s10822-011-9505-2

PMID: 22146969

The Cryptosporidium parvum kinome.

Artz JD, Wernimont AK, Allali-Hassani A, Zhao Y, Amani M, Lin YH, Senisterra G, Wasney GA, Fedorov O, King O, Roos A, Lunin VV, Qiu W, Finerty P, Hutchinson A, Chau I, von Delft F, MacKenzie F, Lew J, Kozieradzki I, Vedadi M, Schapira M, Zhang C, Shokat K, Heightman T, Hui R

BMC Genomics. 2011-9-30 . 12:478 .doi: 10.1186/1471-2164-12-478

PMID: 21962082

Normalizing molecular docking rankings using virtually generated decoys.

Wallach I, Jaitly N, Nguyen K, Schapira M, Lilien R

J Chem Inf Model. 2011-8-22 . 51(8):1817-30 .doi: 10.1021/ci200175h

PMID: 21699246

Structural Chemistry of Human SET Domain Protein Methyltransferases.

Schapira M

Curr Chem Genomics. 2011-8-22 . 5(Suppl 1):85-94 .doi: 10.2174/1875397301005010085

PMID: 21966348

Structural chemistry of the histone methyltransferases cofactor binding site.

Campagna-Slater V, Mok MW, Nguyen KT, Feher M, Najmanovich R, Schapira M

J Chem Inf Model. 2011-3-28 . 51(3):612-23 .doi: 10.1021/ci100479z

PMID: 21366357

Somatic mutations at EZH2 Y641 act dominantly through a mechanism of selectively altered PRC2 catalytic activity, to increase H3K27 trimethylation.

Yap DB, Chu J, Berg T, Schapira M, Cheng SW, Moradian A, Morin RD, Mungall AJ, Meissner B, Boyle M, Marquez VE, Marra MA, Gascoyne RD, Humphries RK, Arrowsmith CH, Morin GB, Aparicio SA

Blood. 2011-2-24 . 117(8):2451-9 .doi: 10.1182/blood-2010-11-321208

PMID: 21190999

Molecular characterization of a novel geranylgeranyl pyrophosphate synthase from Plasmodium parasites.

Artz JD, Wernimont AK, Dunford JE, Schapira M, Dong A, Zhao Y, Lew J, Russell RG, Ebetino FH, Oppermann U, Hui R

J. Biol. Chem.. 2011-2-4 . 286(5):3315-22 .doi: 10.1074/jbc.M109.027235

PMID: 21084289

Recognition and specificity determinants of the human cbx chromodomains.

Kaustov L, Ouyang H, Amaya M, Lemak A, Nady N, Duan S, Wasney GA, Li Z, Vedadi M, Schapira M, Min J, Arrowsmith CH

J. Biol. Chem.. 2011-1-7 . 286(1):521-9 .doi: 10.1074/jbc.M110.191411

PMID: 21047797